Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target; 11 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    24.2     95        0   19.8
Qui1     Qui    44.7    114        0   16.2
Qui2     Qui    16.0    125        0   21.1
Qui3     Qui    46.7    137        0   19.5
Qui4     Qui    21.4     70        0   13.6
Rio1     Rio     0.0     96        0   18.3
Rio2     Rio     2.5    118        0   18.2
Rio3     Rio    15.6     64        0   13.8
Rio4     Rio     3.3     90        0   14.8