Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 1
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    33.3      9        0   29.0
Qui1     Qui    50.0     14        0   27.5
Qui2     Qui     0.0      1        0   22.0
Qui3     Qui    35.7     14        0   31.0
Qui4     Qui    80.0      5        0   12.0
Rio1     Rio     0.0      2        0   18.0
Rio2     Rio     0.0      6        0   15.0
Rio3     Rio     0.0      3        0   15.5
Rio4     Rio     0.0      8        0   19.0