Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 1
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    45.5     11        0   24.5
Qui1     Qui    46.2     13        0   22.5
Qui2     Qui    50.0      2        0   19.0
Qui3     Qui    23.5     17        0   29.5
Qui4     Qui   100.0      4        0   10.0
Rio1     Rio     0.0      4        0   21.0
Rio2     Rio     0.0      7        0   13.0
Rio3     Rio     0.0      2        0   12.5
Rio4     Rio     0.0      9        0   22.5