Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 1
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    30.8     13        0   25.0
Qui1     Qui    43.8     16        0   27.0
Qui2     Qui    21.4     14        0   18.0
Qui3     Qui    12.5     16        0   28.0
Qui4     Qui    44.4      9        0   23.0
Rio1     Rio     0.0     13        0   20.0
Rio2     Rio     0.0      9        0   12.0
Rio3     Rio     0.0      6        0   10.5
Rio4     Rio     0.0     15        0   19.0