Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 2
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    33.3      9        0   22.0
Qui1     Qui    42.9     14        0   25.5
Qui2     Qui    25.0     16        0   19.0
Qui3     Qui    20.0     10        0   22.0
Qui4     Qui    42.9      7        0   20.0
Rio1     Rio     0.0     12        0   18.0
Rio2     Rio     0.0      8        0   12.5
Rio3     Rio     0.0      7        0   11.0
Rio4     Rio     0.0     10        0   15.0