Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 16
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 10 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     2.6     38        0    3.3
Qui1     Qui    19.1     68        0    5.0
Qui2     Qui    54.4     57        0    4.4
Qui3     Qui    25.8     97        0    7.1
Qui4     Qui    34.8     46        0    4.3
Rio1     Rio     2.0    100        0    7.6
Rio2     Rio     0.0     55        0    5.8
Rio3     Rio     2.1     94        0    6.5
Rio4     Rio     0.0     79        0    7.7