Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

26 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     3.8    105        0    9.4
Qui1     Qui     3.0     66        0    5.7
Qui2     Qui     0.0     73        0    6.2
Qui3     Qui     0.0     96        0    8.1
Qui4     Qui     1.7     60        0    6.4
Rio1     Rio    16.9     89        0    8.5
Rio2     Rio    42.3     52        0    7.6
Rio3     Rio    52.9     70        0    7.4
Rio4     Rio    71.1    128        0   10.6