Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 24
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 12 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     3.8     80        0   10.2
Qui1     Qui     0.0     49        0    8.4
Qui2     Qui     7.6     66        0    7.5
Qui3     Qui     0.0     60        0   19.0
Qui4     Qui     0.0     52        0   12.7
Rio1     Rio     0.0     55        0    8.9
Rio2     Rio     1.1     88        0   10.0
Rio3     Rio     0.0     49        0    5.0
Rio4     Rio     0.0     56        0    7.4