Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    88.7    177        0    9.0
Qui1     Qui    52.0    123        0    5.5
Qui2     Qui     2.6    114        0    5.3
Qui3     Qui     0.7    134        0    5.5
Qui4     Qui     0.0    114        0    4.9
Rio1     Rio    93.3    179        0    8.5
Rio2     Rio    92.0    150        0    6.8
Rio3     Rio    89.8    127        0    5.9
Rio4     Rio    95.1    183        0    7.9