Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 20
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

42 CpGs in target; 25 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    44.8    105        0    5.8
Qui1     Qui    41.2    114        0    7.6
Qui2     Qui    42.0    162        0    8.6
Qui3     Qui    56.4    172        0    8.8
Qui4     Qui    95.3     43        0    2.7
Rio1     Rio     0.0    134        0    9.1
Rio2     Rio     1.0     96        0    6.2
Rio3     Rio     0.8    120        0    6.7
Rio4     Rio     0.8    133        0    8.9