Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

35 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    35.2     54        0    4.7
Qui1     Qui    35.9     64        0    6.0
Qui2     Qui    37.5     64        0    4.0
Qui3     Qui    17.1    129        0    7.9
Qui4     Qui    27.8     36        0    3.8
Rio1     Rio    35.1     57        0    5.8
Rio2     Rio    41.4     29        0    4.0
Rio3     Rio     9.1     44        0    3.0
Rio4     Rio    50.0     26        0    4.8