Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 4
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0      5        0   11.0
Qui1     Qui     0.0     10        0   18.5
Qui2     Qui    12.5      8        0   18.0
Qui3     Qui     0.0     15        0   29.0
Qui4     Qui     0.0      8        0   15.0
Rio1     Rio    75.0     12        0   28.5
Rio2     Rio    37.5      8        0   15.0
Rio3     Rio    45.5     11        0   18.5
Rio4     Rio    42.9      7        0   17.0