Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 57
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

47 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     58        0    3.7
Qui1     Qui    71.5    130        0    7.5
Qui2     Qui    56.7     67        1    5.7
Qui3     Qui    63.2    136        0    9.4
Qui4     Qui     1.4     71        0    3.9
Rio1     Rio     1.3     78        0    4.8
Rio2     Rio     1.2     80        0    5.2
Rio3     Rio    87.9     33        0    3.0
Rio4     Rio     1.0     97        0    5.6