Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 35
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

48 CpGs in target; 17 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    44.1     93        1    6.2
Qui1     Qui    46.0     87        0    6.6
Qui2     Qui    73.6     91        0    4.2
Qui3     Qui    59.2     98        0    3.9
Qui4     Qui    87.1     62        0    4.2
Rio1     Rio    64.9    134        0    6.9
Rio2     Rio    69.8    106        0    5.0
Rio3     Rio    71.2     80        0    4.4
Rio4     Rio    47.7    130        0    7.0