Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 3
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

15 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    75.9     54        0    8.8
Qui1     Qui    45.9     61        0   10.0
Qui2     Qui    52.0     50        0    8.4
Qui3     Qui    45.1     51        0    9.2
Qui4     Qui    37.0     54        0   10.8
Rio1     Rio    68.8     48        0    9.2
Rio2     Rio    72.2     72        0   10.0
Rio3     Rio    75.8     33        0    6.5
Rio4     Rio    62.0     79        0   10.0