Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 21
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

13 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    36.7     30        0    2.1
Qui1     Qui    48.1    133        0   10.8
Qui2     Qui    68.7     83        0    7.2
Qui3     Qui              0        0    0.2
Qui4     Qui    52.4     63        0    4.4
Rio1     Rio     3.4    119        0   10.5
Rio2     Rio     3.4     58        0    5.0
Rio3     Rio    27.6     58        0    4.5
Rio4     Rio     7.5     80        0    6.9