Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 23
  seen in >= 2 oysters: 11
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target; 17 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    55.9    188        0   15.1
Qui1     Qui    73.2    157        0   12.4
Qui2     Qui    57.4    115        0    8.7
Qui3     Qui    66.9    160        0   14.1
Qui4     Qui              0        0    0.0
Rio1     Rio    46.7    169        0   14.6
Rio2     Rio    41.7     96        2    7.6
Rio3     Rio    41.4    116        0    9.4
Rio4     Rio    62.6    139        0   12.8