Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 11
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

17 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    70.1     77        0    8.5
Qui1     Qui    96.2     53        0    6.6
Qui2     Qui    98.6     72        0    6.8
Qui3     Qui    93.7     63        0    5.9
Qui4     Qui    96.0     50        0    7.7
Rio1     Rio    67.0     94        0   12.4
Rio2     Rio    58.9    124        0   13.3
Rio3     Rio    87.8     41        0    4.4
Rio4     Rio    64.2    148        0   13.3