Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 34
  seen in >= 2 oysters: 5
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

32 CpGs in target; 14 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    63.1     84        0    6.7
Qui1     Qui     0.0     63        0    3.5
Qui2     Qui    33.3    120        0    8.2
Qui3     Qui    26.4    125        0   10.3
Qui4     Qui    28.0    161        0   10.8
Rio1     Rio     0.0    170        0    9.4
Rio2     Rio     0.0     46        0    2.7
Rio3     Rio     2.4     42        0    4.5
Rio4     Rio     2.2     89        0    5.4