Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 61
  seen in >= 2 oysters: 15
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

19 CpGs in target; 15 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    36.9     84        0    8.0
Qui1     Qui    78.3     46        0    4.7
Qui2     Qui    56.6    145        0   10.1
Qui3     Qui    63.3    188        1   14.9
Qui4     Qui    56.4    117        0   11.1
Rio1     Rio    75.6    119        0   10.3
Rio2     Rio    79.7     79        0    6.3
Rio3     Rio    91.4     93        0    7.0
Rio4     Rio    84.9     93        1    6.9