Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

31 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     9.9    131        1   13.3
Qui1     Qui    43.3     60        0    6.3
Qui2     Qui    56.9     51        0    4.2
Qui3     Qui    38.3     81        0    5.2
Qui4     Qui    53.8    104        0    7.3
Rio1     Rio     0.0     43        0    4.6
Rio2     Rio     0.0     32        0    4.7
Rio3     Rio   100.0     10        0    1.6
Rio4     Rio     3.6     28        0    4.1