Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 5
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    16.7     18        0   27.0
Qui1     Qui    40.0      5        0    9.0
Qui2     Qui    11.1      9        0   23.5
Qui3     Qui     0.0      3        0    6.0
Qui4     Qui     0.0      8        0   23.0
Rio1     Rio    25.0      4        0   15.0
Rio2     Rio    75.0      4        0    4.0
Rio3     Rio    40.0      5        0   15.0
Rio4     Rio    46.2     13        0   24.5