Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

24 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     30        0    2.9
Qui1     Qui     2.6     38        0    4.4
Qui2     Qui    11.8     17        0    2.6
Qui3     Qui     0.0     46        1    4.3
Qui4     Qui     6.1     33        0    3.3
Rio1     Rio    43.6     39        0    6.7
Rio2     Rio    45.2     31        0    5.2
Rio3     Rio    50.0      8        0    4.6
Rio4     Rio    25.0     44        0    5.3