Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 32
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

28 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     8.7     23        0    4.6
Qui1     Qui    70.3     37        0    6.4
Qui2     Qui    33.3      9        0    4.4
Qui3     Qui    73.9     23        0    6.9
Qui4     Qui    36.0     25        0    3.9
Rio1     Rio    48.3     29        0    7.5
Rio2     Rio     6.5     31        0    4.9
Rio3     Rio     4.3     23        0    4.7
Rio4     Rio    40.0     25        0    7.5