Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 35
  seen in >= 2 oysters: 9
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

17 CpGs in target; 9 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     18        0    3.1
Qui1     Qui    39.5     76        0   10.2
Qui2     Qui    56.8     44        0   10.2
Qui3     Qui    44.0     91        0   11.4
Qui4     Qui    52.2     90        1   10.0
Rio1     Rio    10.3     39        0    7.0
Rio2     Rio     8.8     34        0    4.5
Rio3     Rio     0.0     30        0    2.8
Rio4     Rio     8.2     61        0    8.5