Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 6
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

57 CpGs in target; 17 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0    115        1    6.1
Qui1     Qui    41.7    242        0   14.3
Qui2     Qui     2.9    104        0    3.5
Qui3     Qui    55.5    247        0   10.0
Qui4     Qui     1.4     69        1    4.6
Rio1     Rio     0.0    265        1   14.9
Rio2     Rio     0.0    131        0    7.7
Rio3     Rio     1.4     71        3    5.9
Rio4     Rio     1.1    175        0    9.2