Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

14 CpGs in target; 6 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    47.2    159        2   14.3
Qui1     Qui    52.2     67        1    8.4
Qui2     Qui    67.7     65        1    5.9
Qui3     Qui    59.0     78        1    8.8
Qui4     Qui    78.6     98        1    8.2
Rio1     Rio    16.3     43        2    4.1
Rio2     Rio    51.7     58        1    7.2
Rio3     Rio    39.3     56        0    5.9
Rio4     Rio    35.6     45        1    3.4