Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 4
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

30 CpGs in target; 5 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    70.6     51        0    3.5
Qui1     Qui    31.7     63        0    5.5
Qui2     Qui    74.1    116        0    6.1
Qui3     Qui    84.6    104        0    6.4
Qui4     Qui    64.0     86        0    5.4
Rio1     Rio     0.0     69        0    4.0
Rio2     Rio     0.0     82        0    5.1
Rio3     Rio    42.9     42        0    3.9
Rio4     Rio     0.0     63        0    4.5