Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 55
  seen in >= 2 oysters: 18
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

10 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0     63        0   11.2
Qui1     Qui     0.0     49        0    9.1
Qui2     Qui     0.0     49        0   11.8
Qui3     Qui     0.0     69        0   14.6
Qui4     Qui     0.0     19        0    7.6
Rio1     Rio    34.8     66        0   17.7
Rio2     Rio    10.8     37        0   12.3
Rio3     Rio     0.0     34        0    9.1
Rio4     Rio     6.5     62        0   11.8