Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 3
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      4        0    7.0
Qui1     Qui   100.0      2        1   13.0
Qui2     Qui    27.3     11        1   22.5
Qui3     Qui    33.3      3        0    5.0
Qui4     Qui    40.0      5        1   13.0
Rio1     Rio   100.0      5        0    8.5
Rio2     Rio    80.0      5        0    7.0
Rio3     Rio   100.0      4        0    9.0
Rio4     Rio   100.0      5        0    9.0