Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 27
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 8 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     7.3    110        0    7.4
Qui1     Qui     7.4     95        0    7.0
Qui2     Qui     7.4     81        0    4.0
Qui3     Qui     2.1     95        0    6.1
Qui4     Qui     6.2     80        0    6.1
Rio1     Rio    56.0     84        0    6.4
Rio2     Rio    52.8     89        0    5.1
Rio3     Rio    72.4     98        0    6.1
Rio4     Rio    61.8     55        0    4.9