Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 64
  seen in >= 2 oysters: 13
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 1  [CpG-destroying: 1]
    22419491 C>T  Pum=  Qui=0.667  Rio=0.0

28 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     4.7     43        0    3.7
Qui1     Qui    16.9     83        1    6.9
Qui2     Qui    19.2     26        0    3.3
Qui3     Qui    19.4     67        0    5.5
Qui4     Qui    25.9     54        0    4.1
Rio1     Rio    12.5     32        0    6.1
Rio2     Rio    41.4     29        0    3.4
Rio3     Rio     0.0     13        0    2.1
Rio4     Rio    72.7     55        0    5.1