Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 17
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

11 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    54.8     73        0    9.0
Qui1     Qui    38.7     62        0    8.0
Qui2     Qui    43.2     81        0    8.2
Qui3     Qui    35.0     60        0    8.0
Qui4     Qui    47.9     48        0    5.5
Rio1     Rio    69.0    113        0    9.8
Rio2     Rio    83.6     55        0    7.6
Rio3     Rio    67.2     67        0    7.4
Rio4     Rio    70.5     61        0    7.6