Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 33
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target; 7 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    90.4     73        0    6.9
Qui1     Qui    42.1     76        0    7.3
Qui2     Qui    44.9     49        0    3.9
Qui3     Qui    61.4     57        0    5.3
Qui4     Qui    72.9     48        0    4.2
Rio1     Rio    89.9     89        0    7.0
Rio2     Rio    87.0     23        0    3.7
Rio3     Rio    90.2     51        0    4.2
Rio4     Rio    72.6     73        0    5.2