Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    32.4     37        0    7.8
Qui1     Qui    42.9     28        0    7.2
Qui2     Qui    11.1      9        0    5.9
Qui3     Qui    20.0     20        0    6.6
Qui4     Qui    37.9     29        0    7.1
Rio1     Rio    44.1     34        0    9.6
Rio2     Rio    53.8     13        0    8.3
Rio3     Rio    83.3     12        0    4.6
Rio4     Rio    68.8     32        0    6.4