Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

23 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    34.5     58        0    6.8
Qui1     Qui    30.4     46        0    8.1
Qui2     Qui    57.9     19        0    4.3
Qui3     Qui    90.5     21        0    5.5
Qui4     Qui    51.9     27        0    7.1
Rio1     Rio    76.5     17        0    9.8
Rio2     Rio    66.7     12        0    5.5
Rio3     Rio    53.7     67        0    5.8
Rio4     Rio    54.3     46        0    8.6