Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 6
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0      1        0    1.0
Qui1     Qui    46.2     13        0   13.5
Qui2     Qui    55.6      9        0    9.0
Qui3     Qui    47.8     23        0   24.0
Qui4     Qui     0.0      1        0    2.0
Rio1     Rio     0.0      5        0    7.0
Rio2     Rio     0.0      3        0    5.0
Rio3     Rio              0        0    0.0
Rio4     Rio     0.0      6        0    9.0