Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 26
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

37 CpGs in target; 4 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    41.2     51        1    8.3
Qui1     Qui    15.5    103        0    6.2
Qui2     Qui    14.9     47        0    6.1
Qui3     Qui    41.5     94        0    6.8
Qui4     Qui    41.5     41        1    3.4
Rio1     Rio    45.5     44        0    5.6
Rio2     Rio    29.8     47        0    2.7
Rio3     Rio    69.6     46        0    7.0
Rio4     Rio    95.5     22        0    6.4