Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 21
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

35 CpGs in target; 19 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    85.5     76        0    5.5
Qui1     Qui    90.3     72        0    5.5
Qui2     Qui    86.2     94        0    7.1
Qui3     Qui    94.3     70        0    4.3
Qui4     Qui    93.2     88        0    4.1
Rio1     Rio    62.2     74        0    6.8
Rio2     Rio    47.5     59        0    5.5
Rio3     Rio    43.3     97        0    6.6
Rio4     Rio    28.6     77        0    6.1