Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 22
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

26 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    75.0     16        0    2.9
Qui1     Qui    71.4     56        0    6.3
Qui2     Qui    58.8     17        0    3.2
Qui3     Qui    72.3     47        0    6.1
Qui4     Qui    88.9     18        2    3.5
Rio1     Rio    95.0     40        0    4.7
Rio2     Rio    88.2     17        1    3.5
Rio3     Rio    96.6     29        0    4.3
Rio4     Rio    88.4     43        0    6.5