Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 7
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      6        0   11.5
Qui1     Qui    88.9      9        0   11.0
Qui2     Qui    86.7     15        0   14.5
Qui3     Qui   100.0     13        0   14.0
Qui4     Qui   100.0      3        0    3.5
Rio1     Rio    41.7     12        0   13.5
Rio2     Rio    80.0      5        0    4.5
Rio3     Rio     0.0      6        0    6.0
Rio4     Rio    30.0     10        0   11.0