Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 4
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    57.1      7        0   20.0
Qui1     Qui    85.7      7        0   16.0
Qui2     Qui    87.5      8        0   24.5
Qui3     Qui   100.0      3        0   10.0
Qui4     Qui   100.0      4        0   14.0
Rio1     Rio    40.0      5        0   11.0
Rio2     Rio   100.0      1        0   14.5
Rio3     Rio    66.7      3        0   11.0
Rio4     Rio     0.0      2        0    9.0