Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 19
  seen in >= 2 oysters: 0
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

22 CpGs in target; 3 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     3.2     31        0    7.0
Qui1     Qui    36.6     41        0    5.1
Qui2     Qui    25.0     36        0    6.4
Qui3     Qui     5.0     20        0    3.3
Qui4     Qui    15.8     38        0    4.9
Rio1     Rio    18.5     27        0    6.2
Rio2     Rio    17.2     29        0    4.0
Rio3     Rio     9.7     31        0    4.2
Rio4     Rio     4.4     45        0    8.6