pos ref alt in_target n_oysters_with_alt alt_freq_Pum alt_freq_Qui alt_freq_Rio pop_differentiated cpg_destroying Pum1 Qui1 Qui2 Qui3 Qui4 Rio1 Rio2 Rio3 Rio4 89934003 T A True 1 0.0 0.048 0.048 False False 0.00/7 0.00/4 0.00/3 0.17/6 0.00/8 0.00/6 0.25/4 0.00/5 0.00/6 89934030 A G True 1 0.0 0.0 0.048 False False 0.00/7 0.00/2 0.00/5 0.00/5 0.00/8 0.00/7 0.25/4 0.00/4 0.00/6 89934048 A C True 4 0.667 0.684 0.0 True False 0.67/6 1.00/2 1.00/5 0.75/4 0.38/8 0.00/6 0.00/4 0.00/4 0.00/7 89934050 T A True 4 1.0 0.632 0.0 True False 1.00/6 0.50/2 1.00/5 0.75/4 0.38/8 0.00/6 0.00/4 0.00/4 0.00/7 89934090 A G True 1 0.0 0.0 0.071 False False 0.00/6 0.00/1 0.00/3 0.00/3 0.00/3 0.25/4 0.00/4 0.00/1 0.00/5 89934137 C A True 1 0.667 0.0 True False 1.00/1 1.00/2 0.50/2 0.50/4 0.00/3 0.00/4 0.00/1 0.00/3 89934143 C T True 1 0.667 0.0 True True 1.00/1 1.00/2 0.50/2 0.50/4 0.00/3 0.00/4 0.00/1 0.00/3 89934148 A C True 1 0.625 0.0 True False 1.00/1 1.00/1 1.00/2 0.00/1 0.50/4 0.00/4 0.00/5 0.00/1 0.00/6 89934166 A C True 0 0.4 0.0 False False 1.00/1 1.00/1 1.00/1 0.00/1 0.00/2 0.00/4 0.00/5 0.00/2 0.00/8 89934168 C A True 1 0.0 0.071 False False 0.00/1 0.00/1 0.00/1 0.00/2 0.00/3 0.25/4 0.00/2 0.00/5 89934171 A C True 0 0.333 0.0 False False 0.00/1 1.00/1 1.00/1 0.00/2 0.00/2 0.00/3 0.00/5 0.00/2 0.00/8 89934178 T C True 0 0.333 0.0 False False 0.00/1 1.00/1 1.00/1 0.00/2 0.00/2 0.00/3 0.00/4 0.00/2 0.00/6 89934180 A T True 0 0.333 0.0 False False 0.00/1 1.00/1 1.00/1 0.00/2 0.00/2 0.00/4 0.00/4 0.00/2 0.00/6 89934182 T C True 0 0.333 0.0 False False 1.00/1 1.00/1 0.00/2 0.00/2 0.00/4 0.00/4 0.00/2 0.00/6 89934190 C A True 0 0.333 0.0 False False 1.00/1 1.00/1 0.00/2 0.00/2 0.00/4 0.00/3 0.00/3 0.00/4 89934192 T A True 0 0.333 0.0 False False 1.00/1 1.00/1 0.00/2 0.00/2 0.00/4 0.00/3 0.00/3 0.00/6 89934222 T C True 1 0.0 0.125 False False 0.00/1 0.00/2 0.00/2 0.00/5 0.00/1 0.25/4 0.17/6 89934228 T C True 0 0.286 0.0 False False 0.00/1 1.00/2 0.00/2 0.00/2 0.00/5 0.00/2 0.00/4 0.00/5 89934248 A T True 0 0.333 0.0 False False 0.00/1 1.00/2 0.00/3 0.33/3 0.00/5 0.00/2 0.00/4 0.00/6 89934257 C A True 0 0.5 0.0 True False 0.00/1 0.67/3 0.33/3 0.67/3 0.00/3 0.00/2 0.00/4 0.00/4 89934266 A C True 2 0.643 0.0 True False 0.33/3 1.00/5 0.25/4 1.00/2 0.00/6 0.00/2 0.00/3 0.00/4 89934268 T C True 2 0.643 0.0 True False 0.33/3 1.00/5 0.25/4 1.00/2 0.00/5 0.00/3 0.00/3 0.00/4 89934269 A C True 2 0.643 0.067 True False 0.33/3 1.00/5 0.25/4 1.00/2 0.00/5 0.33/3 0.00/3 0.00/4 89934270 T C True 2 0.714 0.0 True False 0.67/3 1.00/5 0.25/4 1.00/2 0.00/5 0.00/3 0.00/3 0.00/4 89934294 T C True 1 0.071 0.0 False False 0.00/3 0.00/5 0.25/4 0.00/2 0.00/6 0.00/3 0.00/3 0.00/5 89934315 A C True 1 0.786 0.0 True False 0.67/3 1.00/6 0.33/3 1.00/2 0.00/6 0.00/3 0.00/3 0.00/5 89934333 A C True 2 0.733 0.0 True False 0.67/3 1.00/6 0.25/4 1.00/2 0.00/5 0.00/2 0.00/3 0.00/5 89934336 T C True 1 0.0 0.133 False False 0.00/3 0.00/6 0.00/4 0.00/2 0.40/5 0.00/2 0.00/3 0.00/5 89934339 T C True 1 0.0 0.071 False False 0.00/3 0.00/6 0.00/4 0.00/2 0.25/4 0.00/2 0.00/3 0.00/5 89934420 T C True 1 0.455 0.0 False False 0.33/3 1.00/1 1.00/4 0.00/2 0.00/4 0.00/1 0.00/1 0.00/1 0.00/4 89934452 C T True 0 0.5 0.0 False True 1.00/1 1.00/3 0.00/2 0.00/1 0.00/1 0.00/2 0.00/5 89934471 G A True 1 0.857 False True 1.00/3 1.00/1 1.00/1 0.80/5 0.00/1 0.00/1 89934537 A G True 0 0.5 0.0 False False 1.00/1 0.33/3 0.00/7 0.00/1 0.00/5 0.00/12 89934541 A G True 1 0.167 0.0 False False 0.00/2 0.25/4 0.00/7 0.00/1 0.00/5 0.00/12 89934546 G T True 0 0.5 0.0 False False 1.00/1 0.33/3 0.00/3 0.00/2 0.00/2 89934645 T A True 2 0.261 0.0 False False 0.33/3 0.67/6 0.33/6 0.00/4 0.00/7 0.00/8 0.00/4 0.00/9 0.00/8 89934670 T C True 1 0.0 0.043 0.0 False False 0.00/5 0.00/7 0.00/6 0.25/4 0.00/6 0.00/8 0.00/5 0.00/9 0.00/6 89934681 C T True 1 0.533 0.0 True True 0.50/2 1.00/6 1.00/2 0.00/4 0.00/3 0.00/8 0.00/2 0.00/5 0.00/6 89934702 T G True 4 0.556 0.346 0.0 False False 0.56/9 0.43/7 0.56/9 0.00/6 0.25/4 0.00/9 0.00/8 0.00/8 0.00/7 89934715 A G True 1 0.0 0.038 0.0 False False 0.00/9 0.00/8 0.00/8 0.00/6 0.25/4 0.00/9 0.00/8 0.00/8 0.00/8 89934716 T A True 1 0.0 0.038 0.0 False False 0.00/9 0.00/8 0.00/8 0.00/6 0.25/4 0.00/9 0.00/8 0.00/8 0.00/8 89934717 T A True 1 0.0 0.037 0.0 False False 0.00/9 0.00/8 0.00/9 0.00/6 0.25/4 0.00/9 0.00/8 0.00/7 0.00/8 89934753 T A True 4 0.875 0.586 0.0 True False 0.88/8 1.00/8 1.00/7 0.00/8 0.33/6 0.00/9 0.00/7 0.00/8 0.00/8 89934761 A G True 1 0.0 0.036 0.0 False False 0.00/9 0.00/8 0.00/7 0.00/9 0.25/4 0.00/8 0.00/7 0.00/8 0.00/8 89934774 G T True 1 0.0 0.125 False False 0.00/3 0.00/1 0.00/1 0.00/2 0.00/1 0.25/4 0.00/3 89934799 T G True 1 0.0 0.036 0.0 False False 0.00/6 0.00/8 0.00/7 0.00/9 0.25/4 0.00/6 0.00/6 0.00/8 0.00/9 89934827 A G True 4 0.286 0.24 0.0 False False 0.29/7 0.29/7 0.43/7 0.00/7 0.25/4 0.00/4 0.00/6 0.00/8 0.00/8 89934847 C T True 2 1.0 0.5 0.071 False True 1.00/5 1.00/5 1.00/3 0.00/6 0.00/2 0.00/3 0.50/2 0.00/6 0.00/3 89934852 G C True 1 0.0 0.125 False False 0.00/1 0.00/2 0.00/1 0.00/2 0.00/3 0.00/1 0.25/4 89934864 A C True 3 0.833 0.381 0.045 False False 0.83/6 0.80/5 0.67/6 0.00/7 0.00/3 0.00/4 0.12/8 0.00/5 0.00/5 89934883 G C True 1 0.125 0.0 False False 0.00/1 0.00/1 0.25/4 0.00/1 0.00/2 0.00/1 0.00/5 0.00/1 0.00/4 89934884 C A True 1 0.0 0.067 0.059 False False 0.00/5 0.25/4 0.00/5 0.00/5 0.00/1 0.00/5 0.00/3 0.17/6 0.00/3 89934885 C G True 1 0.0 0.067 0.0 False False 0.00/5 0.25/4 0.00/5 0.00/5 0.00/1 0.00/4 0.00/3 0.00/6 0.00/3 89934887 G C True 1 0.125 0.0 False False 0.00/1 0.00/1 0.25/4 0.00/1 0.00/2 0.00/1 0.00/4 0.00/1 0.00/4 89934893 C T True 1 0.0 0.071 0.0 False True 0.00/5 0.00/4 0.25/4 0.00/6 0.00/4 0.00/3 0.00/7 0.00/3 89934914 T A True 1 0.75 0.0 0.0 False False 0.75/4 0.00/1 0.00/3 0.00/4 0.00/4 0.00/6 0.00/8 0.00/7 89934915 T A True 1 0.5 0.0 0.08 False False 0.50/4 0.00/1 0.00/3 0.00/4 0.00/4 0.17/6 0.12/8 0.00/7 89934916 A T True 1 0.25 0.125 0.0 False False 0.25/4 0.00/1 0.33/3 0.00/4 0.00/4 0.00/6 0.00/8 0.00/7 89934918 A T True 1 0.5 0.2 0.0 False False 0.50/4 1.00/1 0.00/1 0.00/3 0.00/4 0.00/6 0.00/8 0.00/7 89934985 C T True 1 0.0 0.286 0.154 False True 0.00/5 0.00/1 0.33/3 0.33/3 0.00/2 0.33/3 0.25/4 0.00/4