Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 6
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 1  [CpG-destroying: 1]
    77123427 C>T  Pum=0.154  Qui=0.094  Rio=0.634

1 CpGs in target
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum   100.0      3        0   15.5
Qui1     Qui   100.0      3        0   10.0
Qui2     Qui    83.3      6        0   14.5
Qui3     Qui     0.0      2        0   11.0
Qui4     Qui    66.7      3        0   10.0
Rio1     Rio    50.0      2        1   13.0
Rio2     Rio    66.7      3        1   12.0
Rio3     Rio     0.0      5        1   15.0
Rio4     Rio     0.0      2        1   12.0