Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 38
  seen in >= 2 oysters: 3
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

12 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    50.0     22        0    6.7
Qui1     Qui    87.5     24        0    5.8
Qui2     Qui    88.2     17        0    5.2
Qui3     Qui    86.0     43        0    6.9
Qui4     Qui    88.2     34        0    4.7
Rio1     Rio    54.5     22        0    5.5
Rio2     Rio    75.7     37        0    6.3
Rio3     Rio    87.0     23        0    4.5
Rio4     Rio    72.4     29        0    5.9