Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 36
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

34 CpGs in target; 2 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    76.9    108        0    6.4
Qui1     Qui    40.0     60        0    5.1
Qui2     Qui    23.4     47        0    5.0
Qui3     Qui    21.2     66        0    7.5
Qui4     Qui    34.5     58        0    6.5
Rio1     Rio    77.7    112        0    8.4
Rio2     Rio    65.8     79        0    5.5
Rio3     Rio    78.9     57        0    5.7
Rio4     Rio    78.3     69        0    6.1