Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 14
  seen in >= 2 oysters: 8
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    13.6     22        0   32.0
Qui1     Qui     0.0     19        1   23.5
Qui2     Qui     0.0     17        1   22.0
Qui3     Qui     0.0      8        0   13.5
Qui4     Qui     0.0      9        0   15.5
Rio1     Rio    26.9     26        0   32.0
Rio2     Rio    18.8     16        0   22.0
Rio3     Rio    12.5      8        0   11.0
Rio4     Rio    14.3     21        0   28.0