Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 10
  seen in >= 2 oysters: 2
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

21 CpGs in target; 0 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum    92.9     14        0    4.1
Qui1     Qui    76.9     13        0    3.3
Qui2     Qui    57.1      7        0    4.4
Qui3     Qui    67.9     28        0    3.0
Qui4     Qui    66.7     21        0    3.3
Rio1     Rio    81.0     42        0    4.2
Rio2     Rio    87.5      8        0    2.9
Rio3     Rio    96.0     25        0    5.2
Rio4     Rio    88.5     26        0    4.9