Variant sites (alt >= 25% at informative depth >= 4 in any oyster): 8
  seen in >= 2 oysters: 1
  differ between Qui vs Rio (pooled alt-frequency difference >= 0.5): 0  [CpG-destroying: 0]

1 CpGs in target; 1 testable for SNPs (>= 8 pooled genotype reads at C and G in each of Qui, Rio)
sample   pop   meth%  calls CtoT_snp  depth
Pum1     Pum     0.0      9        0   15.0
Qui1     Qui     0.0      8        0   11.0
Qui2     Qui     0.0      3        0    4.0
Qui3     Qui     0.0      7        0   10.5
Qui4     Qui     0.0      3        0    5.0
Rio1     Rio    80.0      5        0   10.0
Rio2     Rio    55.6      9        0   12.0
Rio3     Rio    77.8      9        0   17.5
Rio4     Rio     0.0      3        0    4.5